FastQCFastQC Report
Thu 9 May 2024
EGAF00008273090

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008273090
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11764905
Total Bases305.8 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA203940.17334606611783096No Hit
CGTTCGTTATCGGAATTAACCAGACA197080.16751516480583567No Hit
GTCTCGTTCGTTATCGGAATTAACCA128110.10889165700870512No Hit
CCACCTACTAAGAACGGCCATGCACC120710.10260176346515336No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)