FastQCFastQC Report
Tue 7 May 2024
EGAF00008325303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008325303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6923
Total Bases519.2 kbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG480.6933410371226346No Hit
GATCACTATTCCTACTTAGAGAGAATAGGACTAACTTTCAGAAATCCAGG120.17333525928065865No Hit
GCACTGTTAATGATGGGAATATCATATTCCGTGGATTTGTTGGGATAAGG110.1588906543406038No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTA110.1588906543406038No Hit
GTGTGTTTTACTTTTTTGTTTGTTTTATTTCACAGTATGATGTAGATTTC100.1444460494005489No Hit
GTGAAAATGGTTCGCTATTCACTTGACCCGGAGAACCCCACGAAATCATG100.1444460494005489No Hit
TGATGTATCATTTAGATGGGAATAGTCACTTTCGCCATCTTAATGTCCCA100.1444460494005489No Hit
GTTCGAGATACAGCTGCATGGACTGTAGGCAGAATTTGTGAGCTGCTTCC100.1444460494005489No Hit
ACTGTTTTTAATAATTTAAGTGTTATGCAGAAAGTTTAAAAATTTTTGAA100.1444460494005489No Hit
GTTCAGTTTTTATTTTCCCACTCTGTTTTCTCTGTATGATTCATTTTGGG90.130001444460494No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAAC90.130001444460494No Hit
GTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGT90.130001444460494No Hit
GGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG90.130001444460494No Hit
ACTTGGGCTCCCTGCTCCAACCTTTGGTCTCCTATAAGTTTATTCAGAGC90.130001444460494No Hit
CTTGGTATTTTTAGAGCATCACTTTGTGAAAGCCCTCAAGCAAAGAGATC90.130001444460494No Hit
AGGACGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATAC90.130001444460494No Hit
CGTCTCAGTTTCCTATGGCTGTTGTAACAAAGTACGAAAAACTGAGTGGC90.130001444460494No Hit
TGAGAGAATTGCAAACTTGAACAGTTCTTTTGTTTTCTCTCCTTTTACTT90.130001444460494No Hit
ACTAATTATACTGTGGCTCCTGCCTCTCAACCTGGAATGGCTCCAAGCCA90.130001444460494No Hit
GTAAAAACTTCTTTGTATGTCAAGTATGTGGTTTTCGGAGTAGACTTCAC90.130001444460494No Hit
TGTATAAGAAATAATTGCACTAATTTTCCAACAGTGTGAAAGTAATTCAA90.130001444460494No Hit
ATCCTTTCCACCATGCTCTCCCCTTCATCAAGCTAACTACCTCTGCTCTT90.130001444460494No Hit
ATAAACAATTCCTACATTTTAAACTGCACCCGATTCTGAGTAGTGGGATG80.11555683952043912No Hit
GACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACCCCTGACCTCGG80.11555683952043912No Hit
AGCTACTCTGGAGGCTGAGGAGTGAGGATCGCTTGAGTCCAAGAGTTTGC80.11555683952043912No Hit
GCTGAGGCATGCCTGCTCGAGAGCCAGCTGTTCCATGTGCAATTTTCCTC80.11555683952043912No Hit
ACACGGTGAAACCCCATCTCTACTAAAAATACAAAATTAGCCAAGCATGC80.11555683952043912No Hit
GTCTGTAATTTGCAGTACCTCTCATGTTGTGCAGTATCTTAAATCTTACA80.11555683952043912No Hit
CCCAGATGTAGAATTTCTCTCTTTGTACTCTTTCTCTTTATTTCTCAGAC80.11555683952043912No Hit
CTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC80.11555683952043912No Hit
AGTTAATCCACTTGAAATTGTTTTACAATAATCAGAACATCCAAACCTCA80.11555683952043912No Hit
GGGACGGAATGGAATGGAATGGAACGGAACGGAACGGAATGGAATGGAAT80.11555683952043912No Hit
AAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACC80.11555683952043912No Hit
AGTTGTTAGAATCTTTGAATCAGAAGGAAAAAAAGCAGCGCTGGTTGACA80.11555683952043912No Hit
GTAGAGGTCAGGCTGCTGAACCAGCCAACACATGGGCTACTGCTGGGAAG80.11555683952043912No Hit
GAGAAATGGGATGGTCAGGGAAGACCTCCCTAAGGAGGTAACACGAGGTG80.11555683952043912No Hit
CCGGAAATGTGGATGTTAAGCACAGCTGGACTTGAAGCCCAGTTCTGCCG80.11555683952043912No Hit
ACAAGATTATTTTTCCTTATGGTAGTTGAAGAATAATGCTTAACCTGTCA80.11555683952043912No Hit
ATTTTAAATTACTTCTATTACCACGTTGTTTTTTAGTAGAATTGTTTCCT80.11555683952043912No Hit
CATCACTAAATGAGGAAAAAAAGTCAAAACAACAACTGGAAAAAATCAGC80.11555683952043912No Hit
GATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTGCAGGTGTGAGCCA80.11555683952043912No Hit
AGGGACCTGAGAGGAGAGGATAATGGAGAATGACTGCTAGACTGCTAGGG70.10111223458038424No Hit
CTAAAAGAAACTATTTTGTAAAATAAGAAGACTTCCATTTTTAATGACCA70.10111223458038424No Hit
TGAGTGTTTTTCCAAAATTTATCCAATTAAGTATAGCTTTTAAGGCTTAG70.10111223458038424No Hit
AGAAAACCGTGTGGAGGTTTCTCAAAATACTAAAAAATAGAACTATATCT70.10111223458038424No Hit
GGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAA70.10111223458038424No Hit
CTTTGTATGTTCCTCTTGATTACTGTAAACTGAACTTGAAAATTTGTTTA70.10111223458038424No Hit
AATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGATAA70.10111223458038424No Hit
AGTTTGCTAAGTAGCAGAAAACTTTCTGAAACACGTAGGATAAAAACTGG70.10111223458038424No Hit
CTACAGCCAGAAGAGATATGAGGAAATTGTTAAGGAAGTCAGCACTTACA70.10111223458038424No Hit
TATTATTTAAAGAAATATTTGTGAAATGAATTGGCATCTTTAGGACTAAG70.10111223458038424No Hit
AGGACAAATTGGAACTTTCTCAGCTGTAATCCATTACAGCCTGATACAGC70.10111223458038424No Hit
CACATATACTATGGTGGTTCCATAAAATTATAATGGATCTGAAAAATTTC70.10111223458038424No Hit
ATTACCACAATTGAGATATTTTAGTAATTGAAGGAACATACACAGATATT70.10111223458038424No Hit
AAGAGTTGCCAAAATACCTTCTGAACTACACTGCATTGTTGTGCCGAGAA70.10111223458038424No Hit
CTTTTATGACACGATAAGCAAGATTCGTTTAAGACAACAACTGGAAATGT70.10111223458038424No Hit
GTGGAGCTTCACCGCTCTGGGCTCACTATCCTCCAGGTACCTGCATGTGG70.10111223458038424No Hit
ATTGGCAGTCCCAGCACAGATGCCAGTGCCAGTGATGTCCACGGCAATTT70.10111223458038424No Hit
AGCCTGATGCCAAAATTCCACCAAATGCAAAACTCACTTTTGAAGTGGAA70.10111223458038424No Hit
GGTGTCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATC70.10111223458038424No Hit
GCAGGAGGTGATAATTAAAGTTGGAGAAAAGAATCTACTAGGAAATTTCA70.10111223458038424No Hit
CTCAGTTGTAGTTGCAGAAAAAAATTAAAGTCACCTCTACTGAACCTTGG70.10111223458038424No Hit
GACAACTGAAGGGGAGCAGATTGCACAGCTCATTGCCGGCTACATCGATA70.10111223458038424No Hit
GCATCTTTCTTCTCAGTGCCTTGGCCCTGTTGAGTCTATCTGGTAACACT70.10111223458038424No Hit
AAACAGTTTGGCCCTAATCTGACTTCCCATTTTGCACTATTTTACCATAC70.10111223458038424No Hit
TATAGTTCCAAAAATTCAAATCACTCACAGCAAATGTTTTAAATATCACT70.10111223458038424No Hit
CGTTAAGCAAATCCCTGCCGTCGTGGAACTGACAGCCTGGAGGGGACGCA70.10111223458038424No Hit
GTTTTGTTGGTTCTGTTGGGTAAGAGGAGTGCACTGCTTTAGAGTTTCTG70.10111223458038424No Hit
AGTAGATTTTGTGGCATTTTTATCTGCACTAAAAAATTTTTTACATGGTG70.10111223458038424No Hit
GCTCTTGATCGAAGCCCCGGTAAACGGCGGCCGTAACAATAACGGTCCTA70.10111223458038424No Hit
GGCATCAGCCTCCAGCACCTTTGTGTTGGATGAATTTAAGCGCAAGTACT70.10111223458038424No Hit
AATAAATTCTATGTTCACAATGATATCTTCAGATACCAAGATGAGGTCTT70.10111223458038424No Hit
CTATCTTTTCTTACCCTTACTTTTGGGACTCAAGGCTAAGGGCTATTGTT70.10111223458038424No Hit
CTTTCTCAAACACAAACCTCACTATGCAACTTTGGAATCTCTGTAGGCTC70.10111223458038424No Hit
AAGGGACACTTAGTCGGTCTGGATGAACCAGCTTCGGGAGCTGGGCAAGA70.10111223458038424No Hit
GGGTAGTCTGATGCCTCCAGCTTTGTTCTTTTTGTTCAAGATTGCTTTGG70.10111223458038424No Hit
CCTAAGCCAGGGTTTTACAACATTGACACTGCTGACATTTTAGGCCAGAG70.10111223458038424No Hit
GGGACACTCCTTTTCTGTTCCTCAGTTGTCGCCCTCACGAGAGGAAGGAG70.10111223458038424No Hit
GGAGATGAATGCCCTGAGAGGCCAGGTGGGTGGAGATGTCAATGTGGAGA70.10111223458038424No Hit
GGAGTATTCAGAAGAGGAGCTGAAGACCCACATCAGCAAGGGTACGCTGG70.10111223458038424No Hit
GACATATTTGAAATCAATGAAGCCTTTGCAGCTGTCTCTGCTGCAATAGT70.10111223458038424No Hit
GTTTCCTGACTTTTTAATGATCGCCATTCTAACTGGTGTGAGATGGTATC70.10111223458038424No Hit
TGAGAAACCAGAGAAGGAGAAGAAAAAAAAGATGAAGAATGAGAACGCAG70.10111223458038424No Hit
GAGAAAAATACCAAGAGATATAATGTTTCTTTTAATTGTCTATGCTTAAT70.10111223458038424No Hit
CAAATATTTGAAAAAACATTTTCTTTTTGAAATACAGAATGTTAATAGAT70.10111223458038424No Hit
CAGTCCCAAGGAACAAGAGATGGTCAAGTCGCTAGAGACATATCAGGGGA70.10111223458038424No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)