FastQCFastQC Report
Tue 7 May 2024
EGAF00008325307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008325307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6815
Total Bases511.1 kbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG320.46955245781364635No Hit
AGATATTACGGATGTTAGATTGCATCTCAGTGTTAAATCTTTACTGATAG130.19075568598679382No Hit
CTTCCTGCAAACTGGTGAATTATAGAAAGCAATCCAGATGTGGTTTACTC120.1760821716801174No Hit
CGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGG110.16140865737344093No Hit
GGAAGATTTTCTGAAATTGCTATTTCCTTAGGTGTTTACTGAACTCAAAA110.16140865737344093No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG110.16140865737344093No Hit
ATAACAGAAGGAAAAAAGCAGGTATAAAAGGTCTAAGAATTGGGACGACT100.1467351430667645No Hit
GTTCGAGATACAGCTGCATGGACTGTAGGCAGAATTTGTGAGCTGCTTCC100.1467351430667645No Hit
GACCTGATATAGATAACATGGATGAGTATGTCCGTAACACAACAGCTAGA100.1467351430667645No Hit
AGTCATAAACAGCAGACCCCAAGCCCTGAGAGCTCATTAATAAACCTAGT90.13206162876008803No Hit
CTTTTACAGTTACACATTTCTAATTGTTGCTGTAAATGCATTATCACTTT90.13206162876008803No Hit
GTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGT90.13206162876008803No Hit
AGTTAATCCACTTGAAATTGTTTTACAATAATCAGAACATCCAAACCTCA90.13206162876008803No Hit
AAACCTTTCAAGATTGGAGATGAAAACAACACTTGTGAAATTAGGTTGGG90.13206162876008803No Hit
AGCCTGATGCCAAAATTCCACCAAATGCAAAACTCACTTTTGAAGTGGAA90.13206162876008803No Hit
GCATCTTTCTTCTCAGTGCCTTGGCCCTGTTGAGTCTATCTGGTAACACT90.13206162876008803No Hit
AGAGAGTTTACTAAAATGGATATGTCAAGTATTTTATTGAGGATGACACA90.13206162876008803No Hit
GGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCT90.13206162876008803No Hit
CTCTACTCCTGAAGGCACCTCTGCGGCTTGTAAGTCTATTCTGGAGATTA80.11738811445341159No Hit
ATTAGTTCTAAGAAGAGATACCTGAGAGTTCTCTTCTTTGGACCTATTTC80.11738811445341159No Hit
CTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTC80.11738811445341159No Hit
CTCACTCGGCTTGAAGTAAGGACCTGAAAGCTTAGCAGCCAATAAAAAGA80.11738811445341159No Hit
ATTTCTGAAATTCTCTGTTATTCTATTTCTACTGTCTTTCCCCACTTTAC80.11738811445341159No Hit
GGAAAGAGTAGCTTCCCTGTATTACCTCCCCTACTCCCTTATCTGTTGTG80.11738811445341159No Hit
TGCGTGGGTGAGCCAAGAAAATACTAATTAATAATAGTAAGTTGTTAGTG80.11738811445341159No Hit
GGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGGCGAGGCTTATCC80.11738811445341159No Hit
CTTACACTGAATACATAGGTGTAAGGGGCGAACCAGGGGAACTGAAACAT80.11738811445341159No Hit
GATTGTGTACAGCTTTTTTCTGGACATGTGTTGTTTAACTTCAGGGATCA80.11738811445341159No Hit
CCTGAAGGACTTCAGCTGCAGACAGATATTTCCTTCCTCTTCTCTCATCC80.11738811445341159No Hit
AGTTTAGTTTGTATGGAAAATATTTTTTATAAATTCTCCTAAAATATTCA80.11738811445341159No Hit
GTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTC80.11738811445341159No Hit
CAGAAATTATTGGAAGTCAATGGCACTAAAGGGCTTTCTGTCAATGATTT80.11738811445341159No Hit
AGTAATCCTAATGATTTTACAGGTAACAAAAGCTTCATAGACTTGAACAT80.11738811445341159No Hit
ATTTTTTGTTATTCTACTTTGCCTTTGTACAGTTTATTTTACTGTGTTTA80.11738811445341159No Hit
AGTATCAAAGCATCATAACACAAAAATAATAAGGATAAAGAAGGGTTCAA80.11738811445341159No Hit
GGGAACTGTCTTCTGTCGAGAAGTAAAGGAAACTTCATGAAGGATGTAGA80.11738811445341159No Hit
GGGCATGGTGGTGCATACCTGTAATCCCAGCTACTCGGGAGGTTGAAGCA70.10271460014673514No Hit
ATCAGGCTCTTACAGTGTACAAGATGCTCTAGTAGTAGAGTGAACAAGAG70.10271460014673514No Hit
CAAGAAAGCCGAGGCTGGGGCTGGGTCAGCAACCGAATTCCAGTTTAGAG70.10271460014673514No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAAC70.10271460014673514No Hit
CGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGAAATTGCTGT70.10271460014673514No Hit
GGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG70.10271460014673514No Hit
CTTTGTATGTTCCTCTTGATTACTGTAAACTGAACTTGAAAATTTGTTTA70.10271460014673514No Hit
CAAAAAGCTATTCATTTGATGAAATAAGAAAAAATGCACAGCTGAATATT70.10271460014673514No Hit
GGGGTGTTGTGAATAAGTTGGACTGGATGACTTCTAACATTCTGTGATGC70.10271460014673514No Hit
AATGTATCCACTAAGACAACAGAATGAAGATACTGACCTGTGATAAAGTT70.10271460014673514No Hit
CTCACACCTGTAATCTCAGCCTGTGGGAGGCCAAGGTGGACAGATCACTT70.10271460014673514No Hit
CATAACATCTTACAAATTGTGTCTCTCCAGGAAATCTTTAAAATGATGTA70.10271460014673514No Hit
GGTGACGTTAGCATTACCCCCAACCTCATTTTAGTTGCCTAAGCATTGCC70.10271460014673514No Hit
GTTAAATGGTGTTAAATTCTGCAAATGGAGGGGAAAAAAATCAAATTCTA70.10271460014673514No Hit
GATCACTATTCCTACTTAGAGAGAATAGGACTAACTTTCAGAAATCCAGG70.10271460014673514No Hit
CAGTGAAATGGAGTATAAGGATAAATGATGTTAATTTTTAAAGCACCAGA70.10271460014673514No Hit
ATTACAAAATAGCTGGCGAGTGCTTTCTGTATTTAAATATTGTAAAAAGA70.10271460014673514No Hit
ACCTAATATAGGGCTATCGTCTGGAGCGCTGATGATGTTAATGAGCACCT70.10271460014673514No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA70.10271460014673514No Hit
ATTACATATAAAATCTAGAGAGAAGCATTCTCAGGAACTTCTTTGTGATG70.10271460014673514No Hit
TGTTGCTGGAGTAGGAGCTGGTTTGGCATATCTAATAAGATAGCCTTACT70.10271460014673514No Hit
GAAAGTAACAAGGACATCATTTGATGGACTCAGACAGCCTGGGGTCCCTC70.10271460014673514No Hit
ACTGTTTTTAATAATTTAAGTGTTATGCAGAAAGTTTAAAAATTTTTGAA70.10271460014673514No Hit
ATTTCTTCCTTTTGCTGTTGCTTCCCCCCTCACACACTTGGTTTTGTTCT70.10271460014673514No Hit
CCTGTATCCTAGGCTACACACTGAGGACTCTGTTCCTCCCCTTTCCGCCT70.10271460014673514No Hit
AGCTCTTCTGATTCCTCCACTGGATCTCCTGGAAACCATGGTAATCATTA70.10271460014673514No Hit
GTCACTCAGGCTGGAGTGCAGTGGCGCAATCTCAGCTCACTGCCACCTCC70.10271460014673514No Hit
CTAGTTTTCTTTGCTTTCTTTTCTCTTTGGTTTATAAGGTATTTATTAAT70.10271460014673514No Hit
CCAAGGCTGACATTGATGTCTCAGGACCGAAAGTGGATGTTGAATGTCCC70.10271460014673514No Hit
TGTGGGAAGGCTTAGACAGCTAGGAGGTTGGCTTAGAAGCAGCCACCCTT70.10271460014673514No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)