FastQCFastQC Report
Tue 7 May 2024
EGAF00008325318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008325318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6998
Total Bases524.8 kbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG430.6144612746499No Hit
CCAAGGCTGACATTGATGTCTCAGGACCGAAAGTGGATGTTGAATGTCCC140.20005715918833952No Hit
GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTG120.17147756501857675No Hit
GAGAAATGGGATGGTCAGGGAAGACCTCCCTAAGGAGGTAACACGAGGTG110.15718776793369535No Hit
GGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCT110.15718776793369535No Hit
ATTTGACAGAATTGGGACTGTGGAACCTGGGTCACTTGAATTTTCTATAT100.14289797084881395No Hit
GGATGGCTCCTCTCGTTCGCCAACATTACTTCATCTTCTCCTCTCTTCCT90.12860817376393255No Hit
AAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTTACC90.12860817376393255No Hit
CAAGGAGAAAGACCAGCCAGAAGGAATCTCAGACATCCTTTACCAGTGCC90.12860817376393255No Hit
GGCATCAGCCTCCAGCACCTTTGTGTTGGATGAATTTAAGCGCAAGTACT90.12860817376393255No Hit
GTTGTTTCTGCCCCGCATTGTATTTTATAGGAATAGTGAAAACATTTAGG90.12860817376393255No Hit
GGAATTTTAATTCTGAAAAGAAATCATCTCTCCTGTCAGAGGAACAACAA90.12860817376393255No Hit
CAGGGATCATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTA90.12860817376393255No Hit
CTATAGCTGATGCAGAAAGTCCAGCCAGTTTACTCATTTCGATTCAGAAT80.11431837667905116No Hit
CGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGG80.11431837667905116No Hit
CGGATTAAAGCTAAAGACATAGTTCCTGGTGATATTGTAGAAATTGCTGT80.11431837667905116No Hit
CTCACACCTGTAATCTCAGCCTGTGGGAGGCCAAGGTGGACAGATCACTT80.11431837667905116No Hit
GTAGTCACACAATAGGTGACCTTTTGTGTTTGGCTGCTTTCACTGGGCAT80.11431837667905116No Hit
GGCATGTGGTAGCGGAGCGTTCCGTAAGTCTGTGAAGGCGGACCCGTGAG80.11431837667905116No Hit
GATCACTATTCCTACTTAGAGAGAATAGGACTAACTTTCAGAAATCCAGG80.11431837667905116No Hit
ATTTCTATAGTGTGTTACTAGAGAGGTTTCTCTGAACGTGTAGAGCACCG80.11431837667905116No Hit
CTCTAGTAGCTGCATCAATACTTACCCTGGTAAGTTAGTTGAAAACCAAA80.11431837667905116No Hit
ATTCATTAGTAACACTTTATTCAAGAAAATTCAGGCTTTGCAGAAGGAGA80.11431837667905116No Hit
ATTTTTTGTTATTCTACTTTGCCTTTGTACAGTTTATTTTACTGTGTTTA80.11431837667905116No Hit
CATCACTAAATGAGGAAAAAAAGTCAAAACAACAACTGGAAAAAATCAGC80.11431837667905116No Hit
GTATTTTATGCACAGAATACACTTAGATTGATAGGAAAGAACTCGTAATG70.10002857959416976No Hit
GTTTAAATAGTCCGACTTCACCCATGGTGTTCTGTGCTTGCAGTGCGAGT70.10002857959416976No Hit
AAAGGACATGACCTCCGAGCAGCTGGATGACATTTTGAAGTACCACACTG70.10002857959416976No Hit
CTCTGACCCAGGTCCTCTGACTTGAAGGCCAGTGCTCTTTCTATTATACT70.10002857959416976No Hit
CATCACTGTGCATAACTCAAGTTCCCTTTGGGGAGCTGTCTGTGCCCTTC70.10002857959416976No Hit
GGAGAAAATGTCCACTGGAGTTTGAATAATGAACTTTGAGTTTGGGTGCA70.10002857959416976No Hit
TGTGGAGACCTACACGGAGGAGGATCCTGAGGGAGCCATGTCTGTAGTCT70.10002857959416976No Hit
CCTTTTTTTTGGGTGGTAGTGGACAGGGTCCCACTCTGTTGCCTAGGCTG70.10002857959416976No Hit
CAAAGCCGCAGAGGAAACATGTCGAGATCAGGCTTCCTGCTTGATAGTCT70.10002857959416976No Hit
TTGTAATATACAATATGTCGTTAACTGTAGTCACCATGCTATGCAGTAGA70.10002857959416976No Hit
CATAACATCTTACAAATTGTGTCTCTCCAGGAAATCTTTAAAATGATGTA70.10002857959416976No Hit
CACAGGTGGAATTAAGAAATCTGGCAAAAAGTAAGCTGTTCCTTGTGCCT70.10002857959416976No Hit
ATCCCCTAGCATCTAAACTTAACAAGGTCACCCAATTGACAGGTTTCTCA70.10002857959416976No Hit
GAAGGATGCAACACATTGTTACAGCCTTTGAAGATTCAGGGGCCATGGGC70.10002857959416976No Hit
CACAAATGGTTCCCAGTTTTTCATCTGCACTGCCAAGACTGAGTGGTTGG70.10002857959416976No Hit
CTTGGTATTTTTAGAGCATCACTTTGTGAAAGCCCTCAAGCAAAGAGATC70.10002857959416976No Hit
CCAAAGCCCATCAGCTTGAGGAAGATATTGTGTCAGTAACACATAAAGCA70.10002857959416976No Hit
CCTTGCGGTAGACACGGGATTTACCCCCTTGGGGACCCTGGTTCTTCAGG70.10002857959416976No Hit
ACTCGGCCCTCATTCTGCACGACGATGAGGTGACAGTCACGGAGGATAAG70.10002857959416976No Hit
ATATTGTAAATGCGATTATGGAATTAACAATGTAACCATATGGAAGCAAC70.10002857959416976No Hit
GGGGCCAGGTGTGGATGTGAACCTGAAAGGGCCTCGGATTTCAGCACCGA70.10002857959416976No Hit
GTTATGGTTAAGTGGGAAACGATGTGGGAAGGCTTAGACAGCTAGGAGGT70.10002857959416976No Hit
GAAGAACCTCAGAACATACCCAAGAGGACAAATCCCCCAGGGGGTAAAGG70.10002857959416976No Hit
GAGATGAAGTAAATAGAATGTGTACTCCAGGAACTGGAAATAATAGATCA70.10002857959416976No Hit
GTTTAGGATTCGCTGTATGAAGGAAGATGGTAAGGGATACTGGAGTGACT70.10002857959416976No Hit
GTTGACTTTTATAAGAGAAACACTCAGCCTTTTAATTGCTGAAGGTCTGG70.10002857959416976No Hit
GCCGCACAGGGTTGGTGGTACCCTCGAGCACACCAGACTTGCAGAAAAAG70.10002857959416976No Hit
GAAGTTAGCAGGAGTTATGAAAGATGGAGTGAACTCAGCAAACAGATATT70.10002857959416976No Hit
GAAAAACTCAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCAT70.10002857959416976No Hit
CACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACAAGTTTCA70.10002857959416976No Hit
GGGCACAGCATGTGTAAATTTCTAAATATGATGGACACCCCCAGCTTCCA70.10002857959416976No Hit
AAAAAAAAAGAAAGATCATTGAGTTCAGGATCAAATTTTTGTTCTGAACA70.10002857959416976No Hit
GAGTTACCATGCCTGGGTAATTAATACATTTTTTATAGAGATGGGGTGTT70.10002857959416976No Hit
AGAAAAGTGTCCACTCAGTGGGGCCTGCTATTCCCCTGAGTTCAAAGGTC70.10002857959416976No Hit
GATTTTTATGGAATTGTGTGGCACTATTGTAGTCTGAATTTTATTGGCTT70.10002857959416976No Hit
GGAAGAGCCAGAAAGTACTAAAGAATCTAAATCATCATGGAAAAGAGTTT70.10002857959416976No Hit
GGAATGCTTGGAGTGTCTTTTCTGTTATTTATAGGGATTCTCTTAAGGCA70.10002857959416976No Hit
AAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATATACTTTGGTTA70.10002857959416976No Hit
CTTGGTTATTGACACTCCAAGAATTAGGAAGCAAACAAGACCTTTTAGTG70.10002857959416976No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)