FastQCFastQC Report
Fri 10 May 2024
EGAF00008326485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008326485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8028990
Total Bases602.1 Mbp
Sequences flagged as poor quality0
Sequence length75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG343680.42804885795100006No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG82410.10264055628416525No Hit
GGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCT82190.1023665492172739No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)