FastQCFastQC Report
Tue 7 May 2024
EGAF00008341373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77
Total Bases11.6 kbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGCAGAGTGGTTGAAGGCGTATCCTCGCAACAGAAGTAGCTTGATAAGA22.5974025974025974No Hit
GTTAAAGAGAGACACATCTAGATGGGATGAAAGGTGCCCTAAGCAGGAGA22.5974025974025974No Hit
AATTAATAGTGTGAGGATTCACTCATTACTGTGAGGAGGGCACCAAGCCA11.2987012987012987No Hit
TCATCATCCTCTCCAGTAGCAAGTGGTGCTTTTCCATCCACAGATTGTTT11.2987012987012987No Hit
GATGCGGGCAGGGAGGCTGGGCTCGAGCCAGCCCCTGCGTTAGCAGGAGG11.2987012987012987No Hit
AGTGTGACCAGCTTGCCGGCTGTGATGGCCGCATTGAAGCAGTGTGCCCC11.2987012987012987No Hit
CGATTGTACGGGTGAGGGTGATTATTATAATAATGTTTGTGTATTCGGCT11.2987012987012987No Hit
CTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGCCGCTGGGG11.2987012987012987No Hit
AGTTGTCCGCAGTGCCAAGGACAAGAGGTTTGAGGAGCTGACAAACCTTA11.2987012987012987No Hit
GGGTTTAAATGCATTTTATTTTTAGACAACCTACATGACATGTTTTTCTT11.2987012987012987No Hit
GGGATGACCTTGCCCACAGCCTTGGCAGCGCCAGTAGAGGCAGGGATGAT11.2987012987012987No Hit
TGGTTTGTCTTTGGGGGCCAGAAACTTTTTGGCTTCCTCAGCTGTGACAG11.2987012987012987No Hit
CACCATTGATGTATGCTATTACACTTTTCCAGTGGAAGAAAACAAAGCCC11.2987012987012987No Hit
TGTGGACACAGTGGCCTGTGGTGCTCTGCACTGTGAACTCACTGTCGCCG11.2987012987012987No Hit
TCTTTGGGTTCCACAATGCTCACGTGGTCAGGCAGGGGCTTCTTAGGGCC11.2987012987012987No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATA11.2987012987012987No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.2987012987012987No Hit
GCAGACTCGTCTTACTTGAGGTCTGAACGCATGGAGCACGCGTTGGCAAT11.2987012987012987No Hit
GATCTCTTCTGTGCCCGTTTCCTGGGCAACCTTCTTGGTGAAGCTTTATT11.2987012987012987No Hit
ATGCAAATCAATTCCATAAGAAGTTACTATGAATCAAAGCGTAAATACAC11.2987012987012987No Hit
GAAGAAGATCATGAATCACCATCTTCAGGCAGGGTACCAGCACCAGACAC11.2987012987012987No Hit
TTGCAATATCCTGGGTGAAATGTCAAAATCACGAAGCGACTGTCAAAAAT11.2987012987012987No Hit
GTCCAGAGCCTCAAGCAGCGTGGTTCCACTGGCATTGCCATCCTTACGGG11.2987012987012987No Hit
CTGTAGTATTTTCCGCATGCTGTGCCCAGTTCAATATTATTGCCACTCAA11.2987012987012987No Hit
GTCTTAGATATACAAAAGATAAATGGATATTTAAAATAGTTCTCTATGCT11.2987012987012987No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTACCACCCACAAA11.2987012987012987No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.2987012987012987No Hit
CAATGTCCCTGAGAAGCCACATGCCCTGGTCACCCTCTTCCTCCTCCTCA11.2987012987012987No Hit
AAGTAGAAGGGCCCAAGGAAGAGTTGGAAGTTGCGGGGGAGAGAGGGTTT11.2987012987012987No Hit
CTAAGCAATATAGATACAGACAATAGTATCTTTCCCATTATATCTTTTAA11.2987012987012987No Hit
GTTATATGTTTGGGATTTTTTAGGTAGTGGGTGGTGAGCTTGAACGCTTT11.2987012987012987No Hit
CCTCTCTACTATATAACGAGTACATTGTCTATGATATTGCTCAGGTAAAT11.2987012987012987No Hit
GGTGATGTGTTGGGCTCTAGAACGCCCAAAAACATGAGATATTTAATCTC11.2987012987012987No Hit
GGGTAAGAGAGAGTGACATTTTAACACATTACTAAAATGTTTAAGCTTTT11.2987012987012987No Hit
ACGTGAAGATCACTTGACTCAGAATACTTCAATGTATTTTGTTCACATTA11.2987012987012987No Hit
CCTTTGTACTGATACACCATGTTGGCAAGCAGTTTGGAGGCAGCTGCTAC11.2987012987012987No Hit
CTTTTATACCGTTTTTTTCAAGTATTGCACAATATAGGTACAAAATTAAT11.2987012987012987No Hit
TTATTCATCAGCCTGCTGAACAGTTCCTTTTTCAGAGACATAGATACCAT11.2987012987012987No Hit
GTGCAAACGGGGAGACGCAGAGGCGGACAAGATGGCGGCGGCAGCTGTAC11.2987012987012987No Hit
TTCTTAAACATCAGAGAATGCACACAGAAGAGGCGCCATATCAGTGCAAA11.2987012987012987No Hit
GTACCCTGCCTTTGAAGCACCTCCTCAGTACGTTTTGCCAACCTATGAAA11.2987012987012987No Hit
TACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCCAACAAACCC11.2987012987012987No Hit
CAGCTTCAAAGAACCCCCGCTCTTGCTTGGTGTTCTGCATCCAAATACGA11.2987012987012987No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTT11.2987012987012987No Hit
CTTGCGGAGGGTGAGCACCCGCTTCTTGGTTCCCACCACACAGCCTTTCA11.2987012987012987No Hit
TCAGGAGTGTGAATATTCTCATTGTCAATGGATTCCAGGACATCCTTACG11.2987012987012987No Hit
TCAATCTAGTGATTACTTTTTGCACCATAATTTGTTTTTTTACTCCACAA11.2987012987012987No Hit
GTTCTGAATGGGTTGCCTAGAAACTCCTTTTTTCCCTTTGATGCCTAGGG11.2987012987012987No Hit
AAGGACAGGTGGTCTCTTCGTTGGGACGTCCCCTTTGCCAGCAGCCTTCT11.2987012987012987No Hit
ATATCAGACATAGCTTTATTGCTGACTCCTGCCCCCTTCAGAGCCCATAG11.2987012987012987No Hit
CTCCTGATAGGGATACTTGGTTAATACAGTCTCCTTCCAGAGGTCGGGGG11.2987012987012987No Hit
CTCCGACGCCTGCTTCACCACCTTCTTGATGTCATCATATTTGGCAGGTT11.2987012987012987No Hit
GAAAAGAAGTATTCTTTTTGGAGTTTTCTGTCATAATGGAAGCCTTATGC11.2987012987012987No Hit
GCGTAATCTCTGTTGGCTTCGCTGTTCTTTAGCTTGAACGGAATCAAAAT11.2987012987012987No Hit
GTCCTTGGATCAACAGCCCGCCAGCTGATTGGATGTCTAGGAATGACTGA11.2987012987012987No Hit
CACGTGGGCCAGACACCTGCTGAGTCGGATTTCCAGGTGCTCGAAATTGC11.2987012987012987No Hit
GGGATTCCGTGTACAATCCATAGACATCTGACCTCGGCACTTAGCATCAT11.2987012987012987No Hit
ACCTTATCAAGGACGGCAAGCTGATCAAGAACAATGCCTCCACTGACTAT11.2987012987012987No Hit
AACCCAATATAAAAGACAGTTTAAAGGGGAGCAGTTCTAGTCAAAGAGGA11.2987012987012987No Hit
TTCTAACTGTAGCCCTTCCTGTGTTCCTGGTTATCCTCTTCTGCTGTTCT11.2987012987012987No Hit
GATCAGACGAAGAGGGGCGTTTGGTATTGGGTTATGGCAGGGGGTTTTAT11.2987012987012987No Hit
CTCCAGCACCATGTCTGGTTTGTCTGGCCCACCAGCCCGGCGCGGCCCTT11.2987012987012987No Hit
GGCCTGTAACGATGAGGTTTCTTCACCCCTCCAGTAGAGGGCGCACTCTT11.2987012987012987No Hit
ATTATGAACTATCCATCTGACCAACTCTTTAACTTCCTTCCTAAATATGA11.2987012987012987No Hit
AGCTTACGAAGTTCTCTCTGATGCAAAGAAAAGGGAATTATATGACAAAG11.2987012987012987No Hit
GTTCAGACATTAAAAAAACTAAGTAAACTGGTTTCCTAATGTAAATAAAT11.2987012987012987No Hit
CTTCTGAGCAGCCGGCGCAAAATCCTCATTCTCCTCATCCATGTGACCTT11.2987012987012987No Hit
GTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCCAGGTTCAA11.2987012987012987No Hit
TGCCAGGACAGGGGAACGAGAGACTGCTTGCTGCGGCAGAGACGCCAGAG11.2987012987012987No Hit
GTATATGCCACAGTCTTGTCCTCAAACTTGTTAGTGAGATGTGAAGGACG11.2987012987012987No Hit
GTGTATAAGAGACAGATTGCGCCATGAACGATCCGGGCCTTTCGCTGCTG11.2987012987012987No Hit
ATTATAGGCAAGATTCAAGTAAGGCTAAGAAAGAAGAGTGTTTCCATTGA11.2987012987012987No Hit
GAATCAGGGCAACTATCAAATTTAAATGTTGAACCAAGTCCTGGTTTTCA11.2987012987012987No Hit
GGCCTTTGCAGCTGGAGCTGATATCAAGGAAATGCAGAACCTGAGTTTCC11.2987012987012987No Hit
ATGCAGGACTAACCTCTATGGGATGCAAAATGACTCCAAGTATGGAACAA11.2987012987012987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)