FastQCFastQC Report
Tue 7 May 2024
EGAF00008341448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Total Bases3.1 kbp
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29.523809523809524No Hit
GTCCTGAGCTGACTGCTTGTTACGGATTTTCCTCCTGACCTTCTTGAGGA14.761904761904762No Hit
GGGCTTCAAACCACACATTTCCCACTACTACTGCCTGGATGTGGCTTCAG14.761904761904762No Hit
TGGCAGAGCTCTCTGACTTGGGTGTATGCTGCCAGGCTGGGTACTTTCAT14.761904761904762No Hit
GAATGTGTGGAGGCAGAATGTTAACACCAGAGAGACCCAGGGGATGAATC14.761904761904762No Hit
GAGATTACAGGCGCCCGCCACCATGCCTGGCTAATTTTTGCATTTTTAGT14.761904761904762No Hit
GGGATTCTGGACAGCCCTGAGGGCACGGCATCCTGTATCCTCGCTCCACT14.761904761904762No Hit
GAATACTATTTTATTTTTATTTTTTTTTTTATTATTTTATTTTATTTTTT14.761904761904762No Hit
CTCCCGAGTAGCTGGGATTAGAGGCACATGCCACCATGCCTGGTTAATTT14.761904761904762No Hit
CTTATGACTGTTCTTCGAAATTATGTTCATCAGTACAGTCATGTACCATA14.761904761904762No Hit
GCGCAGGGGGGACACATCCACAGCCTGTCGTCTCACAGTCCCGGCGCGCC14.761904761904762No Hit
GTGCTGAGTTCTAGTCTCTTGGGGTACAGATGATGTTTGAGTCATCCCTT14.761904761904762No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTTTTTT14.761904761904762No Hit
GCTGCAAGGTGAAGGCCTGTTCTGCCCCTGCTGTCACGAATATTTGGGTC14.761904761904762No Hit
GCGCAATGCTAGGGAAGGGGGGTCCCGACATGATGGCGAGCATGCGAGTG14.761904761904762No Hit
CATTCTCCTCATCCATGTGACCTTCTCTGGCATTCGGGCATTGGCTGTAC14.761904761904762No Hit
TGTTTTTCCTTGCCACATTGGACTTCCAGACGCCATTTGGATTGGGTTTA14.761904761904762No Hit
ATGCCGATCCCCACCGCCCCATTGCGCAATCTGTCTCTTATACACATCTG14.761904761904762No Hit
CATTGAGGTTGCGTATGAGTCTCGCTTCCTTCTCCCCATCTTCGTCCAAG14.761904761904762No Hit
GATGTAAAGTGAAATATTAGTTGGCGGATGAAGCAGATAGTGAGGAAAGT14.761904761904762No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)