FastQCFastQC Report
Tue 7 May 2024
EGAF00008341472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37
Total Bases5.5 kbp
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCGGGACTGGGCATCTCCTACTATTAAAAAGGCTCCACATACTTCACA25.405405405405405No Hit
TGGCAGAACCTTTCATCTCGCCTTTATTGTTCACTATGACTCCTGCATTA12.7027027027027026No Hit
GCAGTGGCACAATCAATGCTCACTGCAACCTCCACCTCCCGAGTTCAAGA12.7027027027027026No Hit
GTCTTACTCCCTTGCTTACTTTATATCTGATTATAAAAGTATTAAGCTCT12.7027027027027026No Hit
GCGTCATGGATTTCAAGGTCTTTTAATCACCTTCGGTTTAATCTCTTTTT12.7027027027027026No Hit
CCCCTGGAGATGGCCCACCTTTCTTTTTGTCAGTTGGCAAACCAGCACCT12.7027027027027026No Hit
ATCCAATACAGGGGCATAGCCGGCGCTTATTTGGCCTGGATGGTTCAGGA12.7027027027027026No Hit
GTGTTGGCGTACAGGTCTTTGCGGATGTCCACGTCACACTTCATGATGGA12.7027027027027026No Hit
GTCCGAAGGCACTGACGATGCAGTACATGGTCTTATTCTCCCATCGCACA12.7027027027027026No Hit
GATTACAGGCGTGAGCCCCTGCGCCTAGCCAAAACAATTTTTTTTTCCTT12.7027027027027026No Hit
GTGATAAGGGTGCTAGTCACAGCCCTGACAGCTTCAGAAAGGGTACCCAC12.7027027027027026No Hit
TCTCTGACGTCCCCCATAGATCTTGGTCATGGAGCCAACCCCAGCGCCAC12.7027027027027026No Hit
CTGTTGTTTTATCAGATTACTAGTGAAATAGAGATGACCCCTTAATGTTG12.7027027027027026No Hit
GTGTACATGGAGTACCACTCATCGCGGAGCAAGGCGCCCAGCAAACATGT12.7027027027027026No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.7027027027027026No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.7027027027027026No Hit
TTCTTCACCTGGCAGGTGTATGTCCCATTGTCGTCGAACTGCAGTTTCCA12.7027027027027026No Hit
GTAGAAGAGCGATGGTGAGAGCTAAGGTCTGGGCGGTGATGTAGAGGGTG12.7027027027027026No Hit
CTGTACAACAAACCCCTGTGACACAAGTTTACCTACATAACAAACCTGCA12.7027027027027026No Hit
CATTACCAGTGAAGGGGCATTTCTTGTCAATGTAGGTGCCCTCAATAGCC12.7027027027027026No Hit
GCAGTAAACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGT12.7027027027027026No Hit
GTCTGAAACACTTCAACCCATTATACAATCCATTGTATTAAAGTGGTTAG12.7027027027027026No Hit
GAATGAACGCATAATCTTTTAACTTCTACACTCGTTCCAGTTTCCCAAAC12.7027027027027026No Hit
CTTCTGTTCTTTAAAAATATTTTCCATTTGGGGCTTCTCAGACATAGCAT12.7027027027027026No Hit
GTTTAGGAGTGGGACTTCTAGGGGATTTAGCGGGGTGATGCCTGTTGGGG12.7027027027027026No Hit
TTCTAAAGGAACTGGAACACGTGAAGGCTTTCCCACACTCCTTGCATTCA12.7027027027027026No Hit
GTCCCCCACCAACAAAAAAAAATTATTTATTTTTTTTTTTTTTTTTTATA12.7027027027027026No Hit
GTAATTCCAGCACTTTGGGAGGCCGAGGAGGAAGGATCGCCTGAGGTCAG12.7027027027027026No Hit
ACATTGGTCTGAGCAGTGACTTTTTTTTAATACGACCTTGAAGGCACAGG12.7027027027027026No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGG12.7027027027027026No Hit
GGCTGTAGTGCAGTGCCGCAATCTCGGCTCACTGCAACCTCTGCCTCCTG12.7027027027027026No Hit
CTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTGTGGGGGGCGG12.7027027027027026No Hit
ATTTTATATCTGTTAAGTGATATACCTAGTTTCTTGAGAGATTAAGATGA12.7027027027027026No Hit
GGGTTGGTCAGTCCCTCCAACAACAGCAAGGAGGATGCCTTCTCCGGGAC12.7027027027027026No Hit
GTTGATGTCTTTAAGATGGATATTTTACAATTTCAGTAAAAAAAATACAA12.7027027027027026No Hit
GGTCAGGTTGGTCTTGAACTCCTGACCTCATGATCCACCCCCGGCTTTTT12.7027027027027026No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)