FastQCFastQC Report
Tue 7 May 2024
EGAF00008341544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Total Bases1.8 kbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAACATGGGAGGCAACCTTAGCCTCCCAGGTTCAAGCAATTCTCATGCC18.333333333333332No Hit
GCTTCCTACTTTTCAGGTTTAAATTTATCTTTTTTATTCTAAAAGTATGT18.333333333333332No Hit
GCTTCCTACTTTTCAGGTTTAAATTTATCTTTTTTCTTCTAAAAGTATGT18.333333333333332No Hit
GGCCGGAGCGCTCTTCCGAGCCGCCTTGGTGGCCAGCTGCTTGCGCGGAG18.333333333333332No Hit
GCCAGCAGCTGGCCAGGATGTGGTCCTGGACCTGGGCTGCGTAGATGCAC18.333333333333332No Hit
GAGCTGTATTTGCCATCATAGGAGGCTTCATTCACTGATTTCCCCTATTC18.333333333333332No Hit
CCACCACACTTAGCAGCAAAAGCCCCATCTCTCTCTCTGGGCTGTGGGGG18.333333333333332No Hit
CTGCCAAGGTTAGCGTCTGTTCACAGGCTGAGTCTGACTTCTTCCTCCCA18.333333333333332No Hit
CCCTTCCTCTTTCTCGCTTCTTCCCCTTTCTCCGCTCTGCTTCCTTCCTT18.333333333333332No Hit
CAAGGACAGTGTGGTGGCCGGCTTCCAGTGGGCCACCAAGGAGGGCGCAC18.333333333333332No Hit
CTCTATCCCCCAGGTTGGAGTGCAGTAGTGGCGTGATCACGGCTCACTGC18.333333333333332No Hit
GATTCCCATCTTCTCATTTTCTGAGGACATCTTCTGGTTTTGTTCTTTCA18.333333333333332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)