FastQCFastQC Report
Tue 7 May 2024
EGAF00008341564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36
Total Bases5.4 kbp
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATGATGTGATTGATATTGAGGATGACCTTGACGATGTCATTGAAG12.7777777777777777No Hit
GTATTGTTCCCAGTGACACTTCAGAGAGCTGGTAGTTAGTAGCATGTTGA12.7777777777777777No Hit
GCTTTGTCCAACGCAAGGACACTGCATTGAAAATGTGCACATCTATCTGA12.7777777777777777No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTTTTTTTTT12.7777777777777777No Hit
CCTCCCCACTAATGCACTAAAAAGCTTCAGTGATAGGGAAAAAAAGGAGG12.7777777777777777No Hit
ATTAAATTTCAGAGTTTTGATTTGAATGCAAGAGTTGTCAAAATAATGAG12.7777777777777777No Hit
CATTAGCATTGTGTGACCACAGTGCCAAGACCATGGCTTTTCAGCATCAC12.7777777777777777No Hit
GACATAGTGGAAGTGGGCTACAACGTAGTACGTGTCGTGTAGTACGATGT12.7777777777777777No Hit
GCGGTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGA12.7777777777777777No Hit
CCGCGGAAGCTTTGTTCTTTTGCTCTTTGCAATAAATCTTGCTGCTGCTC12.7777777777777777No Hit
ATGTATGTGGGGTTTAAAACCTAGATGATGGGTTCATAGGTAAAGCAAAC12.7777777777777777No Hit
CAATATATCCTTACTGAACAAATACAAGCACTTGTTGGTCTCCTACATTT12.7777777777777777No Hit
GATCTAGTAACAGAATAAATCAGTGTATTTACATTTATGTTTGCCCTGAA12.7777777777777777No Hit
CTTATATTATTTTTTATTATACTTTAAGTTCTAGGGTACATGTGCACAAC12.7777777777777777No Hit
CTGTAGTCCTTTCTCTCAATTTTCTTTTAAATACATTTTTTACTCCATGA12.7777777777777777No Hit
ACAGAGAAGTGGAAAGATGACTCTGCCTGTGGTGCAGAAAATGATTAGAA12.7777777777777777No Hit
CTCTGTGCTTGTGCCTTCAACACTTTCACAACGATTTTCTGCTCCTCGAT12.7777777777777777No Hit
GCTCGGGAAACATCCTCCCCTCGGTTACCCCAGTATTGCCCAAGTGGAGG12.7777777777777777No Hit
CTTACATCTTTTCTAATCACAGTGTTGCATATGAGCCTGCCCTCACTCCC12.7777777777777777No Hit
CTCCTAGAGCTACCTGTGGAGCAACCTGCTCAGATACATCAAACATGGAG12.7777777777777777No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTCCTACGAGAAAAA12.7777777777777777No Hit
CCCCCATGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACTGACT12.7777777777777777No Hit
GTACCACTGTACTCAGCCTGGGCAAAAGAGTGAGACTCTATCTCAAAAGA12.7777777777777777No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC12.7777777777777777No Hit
GGTCAGGTCCCGGTATTCCCGGTACATGTTGTGGGTGCCGCTCCGGGAGT12.7777777777777777No Hit
GGTTTGGTAGTTTAGGACCTGTGGGTTTGTTAGGTACTGTTTGCATTAAT12.7777777777777777No Hit
CTACTTTTTGTATTTTTAGTGGAGACGGGGTTTCACCGTGTTGGCCAAGC12.7777777777777777No Hit
ACATTATACTTCCTGGTATTTTATTCTTTTTGTTGGCTTAAAGATTTCTC12.7777777777777777No Hit
GCATACGATTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.7777777777777777No Hit
ACATAGTGAAACCTCATCTTTATAAAAAAATACAAAAATTGGGCCAGGCG12.7777777777777777No Hit
GCTTACAGGTTTAGATATAGTCTGTTAGAATTAAAACCAAGTTTAGTGTT12.7777777777777777No Hit
CCCCCAGGCAATGCGGACAGAGAGTAACCTCGGAGCCAAGGTGTTCTTCT12.7777777777777777No Hit
CTCCCATGAGACTCTAATGCTGCTGCTGACCTGACGGGAGGCAGAGCTCA12.7777777777777777No Hit
CAATTATGCTAATATTTTATGAATTCAAAAGCACTTTACAAGAAAATATA12.7777777777777777No Hit
GGTCAGCACAAAAACAAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.7777777777777777No Hit
CTTCTGCAGGGCACTGAAAGCCTGAACCGGGCCACCCAAAGTATTGAACG12.7777777777777777No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)