FastQCFastQC Report
Tue 7 May 2024
EGAF00008341610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008341610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Total Bases1.9 kbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGCGCAATGGGAGACCTGGGGGGGAGCAAAACCAACGCCTGGCTCGGA17.6923076923076925No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTTCTGATGC17.6923076923076925No Hit
ACATGTGCCCACACATCTTCACCTTGGAAATGTAGCATTTCAAGCTTTAG17.6923076923076925No Hit
ATTGCGCAATGTGCTCACAGGGGGTTGGCCTGGGCAGCGGGAGTGTGGAG17.6923076923076925No Hit
ATTGAGCAATGGCCGGATCGGGAGATAAAATTTGAAATCTGGTTAGGCTG17.6923076923076925No Hit
ATGTTGAAGCTATTGCTTTTGCATATTGTTGTCGTCTCAAAAATCCTATC17.6923076923076925No Hit
ATTGCGCAATGTGACAGCTGGGGAGACGCCGAGATGCGGGTCATGGCGCC17.6923076923076925No Hit
TCCCAGGCCTGGGCGATGGAGCGAAACTGTCTCTTAAAAAATGGCAGGGA17.6923076923076925No Hit
GTGCCAGCTCTGACTCAAGGTGCAGCAGGATCCCGTTGAGCTGCTCCATC17.6923076923076925No Hit
CCCACATTGTCCCCAGGAAGAGCTTCACTCAAAGCTTCATGGTGCATTTC17.6923076923076925No Hit
GCAATGATTCTTAAACTTCAGCCTACATCAGAATCACCTGAAGACCTGTA17.6923076923076925No Hit
ATTGCGCAATGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGT17.6923076923076925No Hit
ATTGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.6923076923076925No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)