FastQCFastQC Report
Tue 7 May 2024
EGAF00008374724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008374724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1248
Total Bases188.4 kbp
Sequences flagged as poor quality0
Sequence length149-151
%GC50

[WARN]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA34027.24358974358974No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA987.852564102564102No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA635.048076923076923No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA483.8461538461538463No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA403.205128205128205No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTA362.8846153846153846No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA332.644230769230769No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA282.2435897435897436No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA282.2435897435897436No Hit
TACGGAGGATTCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA272.1634615384615383No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA241.9230769230769231No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA211.6826923076923077No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA161.282051282051282No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGGGTGCGCA151.201923076923077No Hit
TACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA120.9615384615384616No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA110.8814102564102564No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA110.8814102564102564No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA90.7211538461538461No Hit
TACGGAGGATCGGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA70.5608974358974359No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA70.5608974358974359No Hit
TACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA70.5608974358974359No Hit
AACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA60.4807692307692308No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTGTTGGGTTTAAAGGGAGCGTA50.4006410256410256No Hit
TACGGAGGAGCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA50.4006410256410256No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA50.4006410256410256No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGGGCGTA40.3205128205128205No Hit
TACGGAGGATCCGAGCGTTATGCGGATTTATTGGGTTTAAAGGGAGCGTA40.3205128205128205No Hit
TACGGAGGATCCGAGCGTTATCCGGATTCATTGGGTTTAAAGGGAGCGTA40.3205128205128205No Hit
TACGTAGGGAGCGAGCGTTATCCGGAATTATTGGGTGTAAAGGGTGCGTA40.3205128205128205No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA40.3205128205128205No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAGGGGAGCGCA30.2403846153846154No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAGAGGGAGCGTA30.2403846153846154No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGGGTGCGTA30.2403846153846154No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA30.2403846153846154No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA30.2403846153846154No Hit
TACGCAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA30.2403846153846154No Hit
TACGTAGGTGGCAAGCGTTATCCGGAATCATTGGGCGTAAAGGGTGCGTA30.2403846153846154No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGAGCGTA30.2403846153846154No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGGA30.2403846153846154No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA30.2403846153846154No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGGGTA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCATA20.16025641025641024No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGCGTGTA20.16025641025641024No Hit
TACGGAGGATCAGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTATGCGGATTTATTGGGTGTAAAGGGTGCGTA20.16025641025641024No Hit
AACGTAGGCCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.16025641025641024No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCCGGGTTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.16025641025641024No Hit
TACGGTGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGGGCGCA20.16025641025641024No Hit
TACGAAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA20.16025641025641024No Hit
AACGTAGGGTGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.16025641025641024No Hit
TACGGAGGATCTGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGGGTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGATACGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGAGCAAGGGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCGGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGTGGCAAGCGTTTTCCGGAATTATTGGGCGTAAAGCGCGCGCA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTATTGGGGGTAAAGGGTGCGTA20.16025641025641024No Hit
TACGTAGGGAGGAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTA20.16025641025641024No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTAGTGGGTGTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTG20.16025641025641024No Hit
TACGGAGGATCCGAGCATTATCCGGATTTATTGGGTTTAAAGGGAGCGTA20.16025641025641024No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTGAAGGGAGCGTA20.16025641025641024No Hit
TACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCATAAAGGGTGCGCA20.16025641025641024No Hit
TACTTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.16025641025641024No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA20.16025641025641024No Hit
TACGTAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.16025641025641024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)