FastQCFastQC Report
Tue 7 May 2024
EGAF00008391043

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008391043
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Total Bases2.5 kbp
Sequences flagged as poor quality0
Sequence length150-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA423.52941176470588No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA317.647058823529413No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA211.76470588235294No Hit
TACAGAGGTCTCAAGCGTTGTTCGGAATCACTGGGCGTAAAGCGTGCGTA211.76470588235294No Hit
CAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTG15.88235294117647No Hit
TACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACC15.88235294117647No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATAATTGGGCGTAAAGGGCGCGTA15.88235294117647No Hit
TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTA15.88235294117647No Hit
AACGTAGGTCCCAAGCGTTGTCCGGAATTACTGGGTGTAGAGGGAGCGCA15.88235294117647No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGTGTA15.88235294117647No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)