FastQCFastQC Report
Wed 29 May 2024
EGAF00008434886

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008434886
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65950196
Total Bases9.8 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3352510.5083396567919222No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA722040.10948261624575005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)