FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008458996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008458996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11193976
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGGGAGCCATTCACGCTACTGGAGATCGGAAGAGCAGTGGTCTGAACT117150.1046545034579313No Hit
TGTGGGAGCCATTCACGCTACTGGAGATCGGAAGAGCAGAGGTCTGAACT113740.10160822213662062No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)