FastQCFastQC Report
Wed 31 Jul 2024
EGAF00008487706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008487706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences227526873
Total Bases34.3 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG154601156.794852316192118No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3568100.1568210362562316No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)