FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008501952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008501952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69169425
Total Bases12.1 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10844531.5678213314625644No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3437160.4969189782913477No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA922880.13342311288549819No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)