FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61224458
Total Bases10.7 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6821641.1142017786421237No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4455290.727697744584362No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2487160.40623634430540817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)