FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78000712
Total Bases13.7 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7381860.946383668908048No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5421220.6950218608260909No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA948030.12154119823931864No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)