FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97901499
Total Bases17.2 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20645292.108781807314309No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG17449781.7823812891771964No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1582820.16167474616502042No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1289000.13166294828642003No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)