FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67055270
Total Bases11.8 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6206180.9255320275348977No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5724270.8536644472537356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)