FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72679473
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length31
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1561630.2148653444418894No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)