FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61142188
Total Bases10.7 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8906231.4566423432540556No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4155070.6795749605820453No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT900960.14735488366886706No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)