FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72679473
Total Bases12.7 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11761401.6182560927484986No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10371161.4269723722405088No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7797651.0728820226861029No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)