FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008502950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008502950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65125190
Total Bases11.4 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4707620.7228570081714925No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3995340.613486118044339No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2168570.33298482507306315No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)