FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008503322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008503322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62431662
Total Bases10.9 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15081182.415630069242751No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4399840.7047449737923043No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1595460.25555302372056027No Hit
AATCGAACCCCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCCATGAC638110.10220935652810267No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)