FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008503903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008503903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68301827
Total Bases12 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10692371.5654588566130156No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6042210.8846337302221798No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT853740.12499519229551502No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT822070.12035842028061709No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)