FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008503918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008503918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66675710
Total Bases11.7 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9053081.3577778174390644No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6421160.9630433631677864No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA750800.11260472516903082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)