FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008504010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008504010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78445997
Total Bases13.8 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10537531.3432846038020272No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5774810.7361510109942258No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA870650.11098718013616425No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)