FastQCFastQC Report
Tue 20 Aug 2024
EGAF00008504935

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008504935
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111051382
Total Bases19.5 Gbp
Sequences flagged as poor quality0
Sequence length176
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27152892.4450744791271486No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18375591.6546925998633677No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1505580.13557508001116095No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)