FastQCFastQC Report
Fri 8 Nov 2024
EGAF50000117623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF50000117623
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences727017
Total Bases31.2 Mbp
Sequences flagged as poor quality0
Sequence length43
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT23200.3191122078300782No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT14660.2016459037409029No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT7640.10508695119921542No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)