FastQCFastQC Report
Fri 8 Nov 2024
EGAF50000118908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF50000118908
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences503631
Total Bases21.6 Mbp
Sequences flagged as poor quality0
Sequence length43
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT23700.47058262894857544No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT16820.33397467590358815No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT9030.17929793837154584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)