FastQCFastQC Report
Fri 8 Nov 2024
EGAF50000136704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF50000136704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1193577
Total Bases93 Mbp
Sequences flagged as poor quality0
Sequence length78
%GC33

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA13660.11444590504006025No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)